Re: voltage drain
Put an ammeter between the battery + post and teh boat pos battery cable. The Ammeter should read some amperage. Now disconnect the wiring harness at the motor plug. If the amperage drops to zero, the short is in the boat harness. If it stays, the short is in the motor harness. If it is the motor harness, suspect the voltage regulator. Disconnect the red wire and see if that is it. If so, replace the VR