I'm not sure turning the boat on without the outboard engine on it changed the alignment, but before I did that the outboard engine went on fine and now it is not. And the alignment bar is not direct center when put in, it's to the left. That only leads me to believe that the engine is out of alignment to the left. Do you have any other ideas as to why the alignment bar would be more to the left when it's in.
Also about the locked engine, we over heated the engine for 5 minutes unknowingly, but it started fine the next day and ran fine for 25 minutes before quitting out which lead me to believe the engine might have locked itself up from being too hot. I started the boat with the outdrive off to confirm what I thought about the locked engine and I proved myself wrong. Now I can't get the outdrive back on. If you have any ideas at all I would appreciate it. I can send you a picture of the alignment bar in the engine maybe it is not going in all the way and the engine being too high or too low is making the bar go in slightly crooked?